PPaperPicks

Bonnie Berger

7 papers at tracked venues · 7 at CORE A* · active 2024–2026

Venues

Frequent coauthors

Bowen Jing
×4
Tommi S. Jaakkola
×4
Shuvom Sadhuka
×2
Emma Pierson
×2
Hannes Stärk
×2
Sidhika Balachandar
×1
Nikhil Garg
×1
Divya Shanmugam
×1
Manish Raghavan
×1
John V. Guttag
×1
Haris Smajlovic
×1
David Froelicher
×1

Papers

  1. Urban Incident Prediction with Graph Neural Networks: Integrating Government Ratings and Crowdsourced Reports
    AAAI 2026 ·
    Sidhika Balachandar
    ,
    Shuvom Sadhuka
    , Bonnie Berger,
    Emma Pierson
    ,
    Nikhil Garg
  2. Evaluating multiple models using labeled and unlabeled data
    NeurIPS 2025 ·
    Divya Shanmugam
    ,
    Shuvom Sadhuka
    ,
    Manish Raghavan
    ,
    John V. Guttag
    , Bonnie Berger,
    Emma Pierson
  3. Shechi: A Secure Distributed Computation Compiler Based on Multiparty Homomorphic Encryption
    USENIX Security 2025 ·
    Haris Smajlovic
    ,
    David Froelicher
    ,
    Ariya Shajii
    , Bonnie Berger,
    Hyunghoon Cho
    ,
    Ibrahim Numanagic
  4. AlphaFold Meets Flow Matching for Generating Protein Ensembles
    ICML 2024 ·
    Bowen Jing
    , Bonnie Berger,
    Tommi S. Jaakkola
  5. Dirichlet Flow Matching with Applications to DNA Sequence Design
    ICML 2024 ·
    Hannes Stärk
    ,
    Bowen Jing
    ,
    Chenyu Wang
    ,
    Gabriele Corso
    , Bonnie Berger,
    Regina Barzilay
    ,
    Tommi S. Jaakkola
  6. Equivariant Scalar Fields for Molecular Docking with Fast Fourier Transforms
    ICLR 2024 ·
    Bowen Jing
    ,
    Tommi S. Jaakkola
    , Bonnie Berger
  7. Generative Modeling of Molecular Dynamics Trajectories
    NeurIPS 2024 ·
    Bowen Jing
    ,
    Hannes Stärk
    ,
    Tommi S. Jaakkola
    , Bonnie Berger