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Jun Xia

Hong Kong University of Science and Technology, Guangzhou, China

27 papers at tracked venues · 21 at CORE A* · active 2024–2026

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Venues

NeurIPS ×9IJCAI ×6ICLR ×4AAAI ×3ICML ×2ACL ×1ICDE ×1WWW ×1

Frequent coauthors

Jingbo Zhou
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Hongxin Xiang
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Cheng Tan
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Changxi Chi
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Shaorong Chen
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Zhangyang Gao
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Bozhen Hu
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Xiao Li
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Xuqiang Li
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Jiabei Cheng
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Yue Liu
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Sizhe Liu
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Papers

  1. Departures: Distributional Transport for Single-Cell Perturbation Prediction with Neural Schrödinger Bridges
    AAAI 2026 ·
    Changxi Chi
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  2. Med-SRAF: A Multi-Agent Framework for Medical Reasoning via Semantic Routing and Agentic Fusion
    ACL 2026 ·
    Xiao Li
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  3. Regressor-guided Diffusion Model for De Novo Peptide Sequencing with Explicit Mass Control
    AAAI 2026 ·
    Shaorong Chen
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  4. VecFormer: Towards Efficient and Generalizable Graph Transformer with Graph Token Attention
    WWW 2026 ·
    Jingbo Zhou
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  5. A Comprehensive and Systematic Review for Deep Learning-Based De Novo Peptide Sequencing
    IJCAI 2025 · Jun Xia
  6. Bridging the Gap between Database Search and De Novo Peptide Sequencing with SearchNovo
    ICLR 2025 · Jun Xia
  7. EDBench: Large-Scale Electron Density Data for Molecular Modeling
    NeurIPS 2025 ·
    Hongxin Xiang
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  8. Electron Density-enhanced Molecular Geometry Learning
    IJCAI 2025 ·
    Hongxin Xiang
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  9. GRAPE: Heterogeneous Graph Representation Learning for Genetic Perturbation with Coding and Non-Coding Biotype
    IJCAI 2025 ·
    Changxi Chi
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  10. MTGIB-UNet: A Multi-Task Graph Information Bottleneck and Uncertainty Weighted Network for ADMET Prediction
    IJCAI 2025 ·
    Xuqiang Li
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  11. MeToken: Uniform Micro-environment Token Boosts Post-Translational Modification Prediction
    ICLR 2025 ·
    Cheng Tan
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  12. PRESCRIBE: Predicting Single-Cell Responses with Bayesian Estimation
    NeurIPS 2025 ·
    Jiabei Cheng
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  13. ReNovo: Retrieval-Based \emph{De Novo} Mass Spectrometry Peptide Sequencing
    ICLR 2025 ·
    Shaorong Chen
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  14. A Graph is Worth K Words: Euclideanizing Graph using Pure Transformer
    ICML 2024 ·
    Zhangyang Gao
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  15. AdaNovo: Towards Robust \emph{De Novo} Peptide Sequencing in Proteomics against Data Biases
    NeurIPS 2024 · Jun Xia
  16. An Image-enhanced Molecular Graph Representation Learning Framework
    IJCAI 2024 ·
    Hongxin Xiang
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  17. Cross-Gate MLP with Protein Complex Invariant Embedding Is a One-Shot Antibody Designer
    AAAI 2024 ·
    Cheng Tan
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  18. Deciphering RNA Secondary Structure Prediction: A Probabilistic K-Rook Matching Perspective
    ICML 2024 ·
    Cheng Tan
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  19. Deep Graph Neural Networks via Posteriori-Sampling-based Node-Adaptative Residual Module
    NeurIPS 2024 ·
    Jingbo Zhou
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  20. DiscoGNN: A Sample-Efficient Framework for Self-Supervised Graph Representation Learning
    ICDE 2024 · Jun Xia
  21. End-to-end Learnable Clustering for Intent Learning in Recommendation
    NeurIPS 2024 ·
    Yue Liu
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  22. FlexMol: A Flexible Toolkit for Benchmarking Molecular Relational Learning
    NeurIPS 2024 ·
    Sizhe Liu
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  23. KW-Design: Pushing the Limit of Protein Design via Knowledge Refinement
    ICLR 2024 ·
    Zhangyang Gao
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  24. Learning Complete Protein Representation by Dynamically Coupling of Sequence and Structure
    NeurIPS 2024 ·
    Bozhen Hu
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  25. MMGNN: A Molecular Merged Graph Neural Network for Explainable Solvation Free Energy Prediction
    IJCAI 2024 ·
    Wenjie Du
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  26. NovoBench: Benchmarking Deep Learning-based \emph{De Novo} Sequencing Methods in Proteomics
    NeurIPS 2024 ·
    Jingbo Zhou
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  27. ProtGO: Function-Guided Protein Modeling for Unified Representation Learning
    NeurIPS 2024 ·
    Bozhen Hu
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