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Siyuan Li

Westlake University, School of Engineering, Hangzhou, China

33 papers at tracked venues · 30 at CORE A* · active 2024–2026

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Venues

ICLR ×8NeurIPS ×5AAAI ×4CVPR ×4ICML ×4IJCAI ×2ACL ×1ACM MM ×1ECCV ×1ICCV ×1SIGKDD ×1WWW ×1

Frequent coauthors

Cheng Tan
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Yufei Huang
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Zhangyang Gao
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Lirong Wu
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Zicheng Liu
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Qirong Yang
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Jingbo Zhou
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Jingxuan Wei
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Zedong Wang
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Qi Chen
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Di Wu
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Chao Xu
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Papers

  1. Compliance-to-Code: Enhancing Financial Compliance Checking via Code Generation
    SIGKDD 2026 · Siyuan Li
  2. MergeDNA: Context-Aware Genome Modeling with Dynamic Tokenization Through Token Merging
    AAAI 2026 · Siyuan Li
  3. TrinityDNA: A Bio-Inspired Foundational Model for Efficient Long-Sequence DNA Modeling
    AAAI 2026 ·
    Qirong Yang
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  4. VecFormer: Towards Efficient and Generalizable Graph Transformer with Graph Token Attention
    WWW 2026 ·
    Jingbo Zhou
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  5. AlphaFold Database Debiasing for Robust Inverse Folding
    NeurIPS 2025 ·
    Cheng Tan
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  6. DaCapo: Score Distillation as Stacked Bridge for Fast and High-quality 3D Editing
    CVPR 2025 ·
    Yufei Huang
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  7. EVA: Geometric Inverse Design for Fast Protein Motif-Scaffolding with Coupled Flow
    ICLR 2025 ·
    Yufei Huang
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  8. From Words to Structured Visuals: A Benchmark and Framework for Text-to-Diagram Generation and Editing
    CVPR 2025 ·
    Jingxuan Wei
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  9. MeToken: Uniform Micro-environment Token Boosts Post-Translational Modification Prediction
    ICLR 2025 ·
    Cheng Tan
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  10. MergeVQ: A Unified Framework for Visual Generation and Representation with Disentangled Token Merging and Quantization
    CVPR 2025 · Siyuan Li
  11. Rep-MTL: Unleashing the Power of Representation-Level Task Saliency for Multi-Task Learning
    ICCV 2025 ·
    Zedong Wang
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  12. ResearchPulse: Building Method-Experiment Chains through Multi-Document Scientific Inference
    ACM MM 2025 ·
    Qi Chen
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  13. SketchAgent: Generating Structured Diagrams from Hand-Drawn Sketches
    IJCAI 2025 ·
    Cheng Tan
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  14. Taming LLMs with Gradient Grouping
    ACL 2025 · Siyuan Li
  15. Towards Homogeneous Lexical Tone Decoding from Heterogeneous Intracranial Recordings
    ICLR 2025 ·
    Di Wu
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  16. Boosting the Power of Small Multimodal Reasoning Models to Match Larger Models with Self-consistency Training
    ECCV 2024 ·
    Cheng Tan
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  17. FaceChain-ImagineID: Freely Crafting High-Fidelity Diverse Talking Faces from Disentangled Audio
    CVPR 2024 ·
    Chao Xu
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  18. Instructor-inspired Machine Learning for Robust Molecular Property Prediction
    NeurIPS 2024 ·
    Fang Wu
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  19. KW-Design: Pushing the Limit of Protein Design via Knowledge Refinement
    ICLR 2024 ·
    Zhangyang Gao
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  20. Learning to Predict Mutational Effects of Protein-Protein Interactions by Microenvironment-aware Hierarchical Prompt Learning
    ICML 2024 ·
    Lirong Wu
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  21. LongVQ: Long Sequence Modeling with Vector Quantization on Structured Memory
    IJCAI 2024 ·
    Zicheng Liu
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  22. MAPE-PPI: Towards Effective and Efficient Protein-Protein Interaction Prediction via Microenvironment-Aware Protein Embedding
    ICLR 2024 ·
    Lirong Wu
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  23. MogaNet: Multi-order Gated Aggregation Network
    ICLR 2024 · Siyuan Li
  24. PhyloGen: Language Model-Enhanced Phylogenetic Inference via Graph Structure Generation
    NeurIPS 2024 ·
    Chenrui Duan
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  25. Protein 3D Graph Structure Learning for Robust Structure-Based Protein Property Prediction
    AAAI 2024 ·
    Yufei Huang
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  26. RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-based RNA Design
    ICLR 2024 ·
    Cheng Tan
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  27. Re-Dock: Towards Flexible and Realistic Molecular Docking with Diffusion Bridge
    ICML 2024 ·
    Yufei Huang
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  28. SemiReward: A General Reward Model for Semi-supervised Learning
    ICLR 2024 · Siyuan Li
  29. Short-Long Convolutions Help Hardware-Efficient Linear Attention to Focus on Long Sequences
    ICML 2024 ·
    Zicheng Liu
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  30. TopoFR: A Closer Look at Topology Alignment on Face Recognition
    NeurIPS 2024 ·
    Jun Dan
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  31. UniIF: Unified Molecule Inverse Folding
    NeurIPS 2024 ·
    Zhangyang Gao
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  32. VQDNA: Unleashing the Power of Vector Quantization for Multi-Species Genomic Sequence Modeling
    ICML 2024 · Siyuan Li
  33. Wavelet-Driven Spatiotemporal Predictive Learning: Bridging Frequency and Time Variations
    AAAI 2024 ·
    Xuesong Nie
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